Search Keyword:


Search option:


IID50071  DNA-binding protein RAP1 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c)) P11938
  :order  :disorder  :conflict  :PDB cluster  :ProS  :SCOP Domain  :Pfam Domain
Networkxml
Experiment
827
fasta
 order/disorder by at least rule
     disorder by at least rule
     order by at least rule
 order/disorder by majority rule
Seq 116-212 Monomer :
 Evidence NMR 2l42 A Reference
       Region 2l42 A 116-212 order
       Region 2l42 A 116-124 high_rmsd
       Region 2l42 A 212-212 high_rmsd
Seq 353-602 Monomer :
 Evidence X-RAY 4gfb A Reference
       Region 4gfb A 358-482 order
       Region 4gfb A 483-501 disorder
       Region 4gfb A 502-581 order
       Region 4gfb A 582-582 disorder
       Region 4gfb A 583-595 order
       Region 4gfb A 596-602 disorder
 Evidence X-RAY 1ign A Reference
       Region 1ign A 353-359 disorder
       Region 1ign A 360-481 order
       Region 1ign A 482-512 disorder
       Region 1ign A 513-564 order
       Region 1ign A 565-571 disorder
       Region 1ign A 572-578 order
       Region 1ign A 579-586 disorder
       Region 1ign A 587-594 order
       Region 1ign A 595-598 disorder
 Evidence X-RAY 1ign B Reference
       Region 1ign B 353-359 disorder
       Region 1ign B 360-481 order
       Region 1ign B 482-512 disorder
       Region 1ign B 513-564 order
       Region 1ign B 565-571 disorder
       Region 1ign B 572-578 order
       Region 1ign B 579-586 disorder
       Region 1ign B 587-594 order
       Region 1ign B 595-598 disorder
 Evidence X-RAY 3ukg A Reference
       Region 3ukg A 360-479 order
       Region 3ukg A 480-498 disorder
       Region 3ukg A 499-601 order
Seq 627-827 Hetero hexamer : IID50224Complex
 Evidence X-RAY 4bj5 C Reference
       Region 4bj5 C 627-674 disorder
       Region 4bj5 C 675-825 order
       Region 4bj5 C 826-827 disorder
 Evidence X-RAY 4bj5 E Reference
       Region 4bj5 E 627-674 disorder
       Region 4bj5 E 675-825 order
       Region 4bj5 E 826-827 disorder
Seq 627-827 Hetero trimer : IID50224Complex
 Evidence X-RAY 4bj6 C Reference
       Region 4bj6 C 627-674 disorder
       Region 4bj6 C 675-825 order
       Region 4bj6 C 826-827 disorder
 Evidence X-RAY 4bj6 E Reference
       Region 4bj6 E 627-674 disorder
       Region 4bj6 E 675-825 order
       Region 4bj6 E 826-827 disorder
Seq 627-827 Hetero dimer : IID50206Complex
 Evidence X-RAY 4bjt C Reference
       Region 4bjt C 627-675 disorder
       Region 4bjt C 676-827 order
 Evidence X-RAY 4bjt A Reference
       Region 4bjt A 627-675 disorder
       Region 4bjt A 676-827 order
 Evidence X-RAY 4bjt B Reference
       Region 4bjt B 627-675 disorder
       Region 4bjt B 676-827 order
Seq 672-827 Hetero trimer : IID50067Complex
 Evidence X-RAY 3owt A Reference
       Region 3owt A 672-676 disorder
       Region 3owt A 677-824 order
       Region 3owt A 825-827 disorder
 Evidence X-RAY 3owt B Reference
       Region 3owt B 672-675 disorder
       Region 3owt B 676-823 order
       Region 3owt B 824-827 disorder
Seq 672-827 Monomer :
 Evidence X-RAY 3cz6 A Reference
       Region 3cz6 A 672-673 disorder
       Region 3cz6 A 674-824 order
       Region 3cz6 A 825-827 disorder
 Evidence X-RAY 3cz6 B Reference
       Region 3cz6 B 672-673 disorder
       Region 3cz6 B 674-824 order
       Region 3cz6 B 825-827 disorder
Seqphosphorylation
    486-486 Phosphothreonine
    731-731 Phosphoserine
 
Prediction
DICHOT
Disorder 1-119,213-352,595-673,825-827
Known Domain 120-212,353-594,674-824
SCOPe RPS-Blast
     1kzyC1 112-209 4e-07 c.15.1.4 53BP1
     1ignA1 360-445 2e-29 a.4.1.6 DNA-binding domain of rap1
     1ignA2 446-594 2e-50 a.4.1.6 DNA-binding domain of rap1
SCOP Hmmer
     1kzyC1 95-213 1.1e-13 c.15.1.4 53BP1
     1ignA1 360-439 4.3e-19 a.4.1.6 DNA-binding doma...
     1ignA2 446-594 2.1e-67 a.4.1.6 DNA-binding doma...
Pfam RPS-Blast
     PF16589 127-198 4e-04 BRCT domain, a BRCA1 C-term...
     PF08914 363-414 8e-04 Rap1 Myb domain
     PF09197 448-578 3e-39 Rap1, DNA-binding
     PF11626 748-821 6e-19 TRF2-interacting telomeric ...
Pfam Hmmer
    PF16589 127-207 1.5e-21 BRCT domain, a BRCA1 C-ter...
    PF00249 362-411 4.7e-14 Myb-like DNA-binding domai...
    PF09197 448-579 6.9e-49 Rap1, DNA-binding
    PF11626 742-823 8.9e-27 TRF2-interacting telomeric...